Crystal Lab › Silicates & minerals
Hydroxyapatite Ca₅(PO₄)₃(OH)
Apatite · space group P63/m (No. 176) · Z = 2
Symmetry elements and Wyckoff positions (interactive)
Hydroxyapatite in P63/m
SettingLoading the group…
x = 0.10, y = 0.17, z = 0.08
Unit cell
- Lattice constants
- a = 9.417 Å, b = 9.417 Å, c = 6.875 Å; α = 90°, β = 90°, γ = 120°
- Cell volume
- 527.9 ų
- Atoms in the cell
- 44 (Ca 10, P 6, O 26, H 2)
- Formula units Z
- 2
- Calculated density
- 2.58 g cm⁻³
- Shortest contact
- 1.085 Å
Coordination
- Ca
- CN 6 at 2.40 Å (6 O)
- P
- CN 4 at 1.53 Å (4 O)
- O
- CN 1 at 1.53 Å (0.92 P + 0.08 H)
- H
- CN 2 at 1.09 Å (1.5 O)
About the structure
- The mineral of bone and tooth enamel: the fluorapatite framework (also in this lab) with OH⁻ instead of F⁻ in the channels along c, the hydroxide sitting slightly off the mirror plane.
- Fluoride in toothpaste exchanges that OH⁻ for F⁻ at the surface, giving the more acid-resistant fluorapatite; synthetic hydroxyapatite is the standard bone-graft and implant-coating material.
- Coordinates from the Crystallography Open Database, entry 9001233 (open data); hydrogen and water sites with partial occupancy below 0.5 are left out. Some sites are partially occupied in the real crystal.
Atom positions (fractional, one cell)
| Atom | x | y | z |
|---|---|---|---|
| Ca | 0.6667 | 0.3333 | 0.0014 |
| Ca | 0.6667 | 0.3333 | 0.4986 |
| Ca | 0.3333 | 0.6667 | 0.5014 |
| Ca | 0.3333 | 0.6667 | 0.9986 |
| Ca | 0.9934 | 0.2471 | 0.2500 |
| Ca | 0.2536 | 0.0066 | 0.2500 |
| Ca | 0.7464 | 0.9934 | 0.7500 |
| Ca | 0.2471 | 0.2536 | 0.7500 |
| Ca | 0.7529 | 0.7464 | 0.2500 |
| Ca | 0.0066 | 0.7529 | 0.7500 |
| P | 0.3686 | 0.3987 | 0.2500 |
| P | 0.0301 | 0.6314 | 0.2500 |
| P | 0.9699 | 0.3686 | 0.7500 |
| P | 0.3987 | 0.0301 | 0.7500 |
| P | 0.6013 | 0.9699 | 0.2500 |
| P | 0.6314 | 0.6013 | 0.7500 |
| O | 0.4850 | 0.3289 | 0.2500 |
| O | 0.8439 | 0.5150 | 0.2500 |
| O | 0.1561 | 0.4850 | 0.7500 |
| O | 0.3289 | 0.8439 | 0.7500 |
| O | 0.6711 | 0.1561 | 0.2500 |
| O | 0.5150 | 0.6711 | 0.7500 |
| O | 0.4649 | 0.5871 | 0.2500 |
| O | 0.1222 | 0.5351 | 0.2500 |
| O | 0.8778 | 0.4649 | 0.7500 |
| O | 0.5871 | 0.1222 | 0.7500 |
| O | 0.4129 | 0.8778 | 0.2500 |
| O | 0.5351 | 0.4129 | 0.7500 |
| O | 0.2580 | 0.3435 | 0.0703 |
| O | 0.0855 | 0.7420 | 0.4297 |
| O | 0.9145 | 0.2580 | 0.5703 |
| O | 0.3435 | 0.0855 | 0.9297 |
| O | 0.6565 | 0.9145 | 0.0703 |
| O | 0.2580 | 0.3435 | 0.4297 |
| O | 0.7420 | 0.6565 | 0.5703 |
| O | 0.9145 | 0.2580 | 0.9297 |
| O | 0.0855 | 0.7420 | 0.0703 |
| O | 0.6565 | 0.9145 | 0.4297 |
| O | 0.3435 | 0.0855 | 0.5703 |
| O | 0.7420 | 0.6565 | 0.9297 |
| O | 0.0000 | 0.0000 | 0.1979 |
| O | 0.0000 | 0.0000 | 0.6979 |
| H | 0.0000 | 0.0000 | 0.0400 |
| H | 0.0000 | 0.0000 | 0.4600 |
Z, coordination numbers, distances, density and packing on this page are computed from these coordinates.